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    REVIEW ARTICLE

    Circulating nucleic acids: possible inherited effects

    PETER GAHAN*

    Anatomy & Human Sciences, Kings College London, London Bridge, London SE1 1UL, UK

    Received 17 June 2013; revised 8 July 2013; accepted for publication 8 July 2013

    The presence of circulating nucleic acids in man, animals and plants is well documented. It is clear that suchnucleic acids can not only circulate freely within an organism, but can also enter cells when their biology may bechanged either epigenetically or genetically. Evidence is presented concerning a possible influence of these nucleic

    acid fragments on the genetics of the F1 generation of man, animals and plants. The data presented also offer amechanism by which the incorporation of horizontally transferred genes between organisms may be achieved. Therole that circulating nucleic acids might play in modifying the F1 generation and possibly the evolutionary processis considered. 2013 The Linnean Society of London, Biological Journal of the Linnean Society, 2013, , .

    ADDITIONAL KEYWORDS: animals circulating nucleic acids epiphytes eutheria horizontal genetransfer man ova parasites sperm vascular plants.

    INTRODUCTION

    The nucleic acids present in the circulatory system of

    eukaryote organisms include genome sequences

    derived through controlled release and/or clearance of

    such fragments from cells. These fragments are able to

    move around the organism and to enter other cells

    where they may change the biology of the recipient

    cells (Zamecnik et al., 1994; Gahan & Stroun, 2010a).

    This may be an important aspect for the field of

    epigenetic variations (Gahan & Stroun, 2010a; Peters

    & Pretorius, 2011). However, there is a need to ques-

    tion the assumption that biological variations are

    limited to epigenetic events only. This is a result of

    some nucleic acid fragments passing into the germ-line

    cells and hence into the offspring, sometimes leading

    to non-Mendelian inheritance (Yagishita, 1961a, b;

    Stroun, 1962; Stroun, Mathon & Stroun, 1963a). Such

    inheritance is clearly shown by grafting experiments

    in plants. Although heterografts can lead to epigenetic

    changes in the offspring, homografts can lead to

    genetic inheritance (Yagishita, 1961a, b; Stroun, 1962;

    Stroun et al., 1963a). This was assumed to result from

    the movement of DNA from the host to the graft.Similarly, Stroun et al. (1958, 1963b) demonstrated

    that birds of the white leghorn variety, which were

    repeatedly injected with blood from the grey guinea

    fowl, produced progeny with some grey or black-

    flecked feathers in the second and later generations.

    Nucleic acids readily pass by horizontal transfer

    between prokaryotes (Davis et al., 1973; Dunning

    Hotopp et al., 2007; Nosenko & Bhattacharya, 2007),

    between prokaryotes and eukaryotes (Heinemann &

    Sprague, 1989; Doolittle et al., 1990; Scholl et al.,

    2003; Morrison et al., 2007; Craig et al., 2008;

    Gladishev, Meselson & Arkhipova, 2008), between

    eukaryotes and prokaryotes (Nielsen et al., 1998;Pontoroli et al., 2009; Demanche et al., 2011),

    and between eukaryotes (Montes et al., 2003;

    Bergthorsson et al., 2004; Davis & Wurdack, 2004;

    Davis, Anderson & Wurdack, 2005; Barkman et al.,

    2007; Park, Manen & Schneeweiss, 2007; Richardson

    & Palmer, 2007; Gladishev et al., 2008; Keeling &

    Palmer, 2008; Nedelcu et al., 2008; Rumpho et al.,

    2008; Whitaker, McConkey & Westhead, 2009; Gilbert

    et al., 2010; Mower et al., 2010; Yoshida et al.,

    2010).*E-mail: [email protected]

    bs_bs_banner

    Biological Journal of the Linnean Society, 2013, , .

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    Circulating nucleic acids (CNAs), both DNA and

    RNAs, can exert both epigenetic and genetic changes,

    thus offering an explanation for the way in which

    horizontally-transferred genes may influence the off-

    spring of the recipient eukaryote.

    Consequently, there is a need to revisit the concept

    of the horizontal gene transfer (HGT) aspect of the

    CNAs leading to both genetic and epigenetic effects.

    The present review considers the involvement of

    total CNAs in eukaryotes in the induction of both

    epigenetic and genetic changes in eukaryote organ-isms. Furthermore, it examines a possible role for

    these nucleic acid fragments in the genetics of the F1generation and, hence, possibly in the evolutionary

    process.

    ORIGINS OF CIRCULATING NUCLEIC ACIDS

    The release of nucleic acids into the prokaryote envi-

    ronment appears to be limited to prokaryote cell

    breakdown and nucleic acid release, whereas various

    specific mechanisms exist for DNA transfer between

    individual prokaryotes (Davis et al., 1973; Nosenko &

    Bhattacharya, 2007). However, the origin of the CNAsin eukaryotes is manifold. Thus, there are at least

    eleven possible endogenous sources of both RNA and

    DNA in the man/animal (blood) circulatory system

    (Table 1) and at least nine endogenous sources

    of plant CNAs (Table 2). In the case of plants,

    although the soil contains a variety of DNAs, they are

    unlikely to enter the circulatory system because they

    will be degraded upon entry to the root system

    (Gahan et al., 1968, 1974; Paungfoo-Lonhienne et al.,

    2010).

    CAN CNAS BE INVOLVED IN MODIFYINGTHE F1 GENERATION AND,

    SUBSEQUENTLY, THEEVOLUTIONARY PROCESS?

    For CNAs to operate in a way that will influence

    evolution, it is necessary that such nucleic acid

    fragments/molecules can freely access cells into which

    they enter and modify the biology of the recipient cell.

    For there to be a modification of the F1 generation and

    an evolutionary implication, the DNA must be able to:

    (1) access the gonads; (2) directly enter either sperm

    and eggs or their precursor cells; and (3) integrateinto (a) chromosome(s) so affecting the offspring.

    The experimental evidence for the possible involve-

    ment of DNA in genetic changes can be seen with

    experiments on both vascular plants and animals

    with circulatory systems. However, there are major

    differences between the plant and animal reproduc-

    tive systems in that the majority of animals have

    a distinct germ cell line separate from the soma

    (Weissman, 1893; Maynard Smith, 1969, 1989),

    whereas vascular plants develop reproductive

    systems from vegetative cells on each reproduc-

    tive occasion (Esau, 1953; Fahn, 1982). Equally,

    pteridophyta produce sexual reproductive organs andsporogonia from vegetative cells, as do bryophytes

    with their more primitive water conducting tissues,

    whereas the gymnosperma also derive their sexual

    organs from vegetative cells. The change from veg-

    etative to reproductive cells, i.e. no germ cell line, in

    plants is, perhaps, one of the strongest arguments

    against Weissmans general theory (Maynard Smith,

    1969, 1989).

    Hence, the mechanisms of CNA entry into reproduc-

    tive systems will be considered separately primarily

    Table 1. Possible origins of circulating nucleic acids in

    man/animals

    DNA and RNAs*

    1. Blood cell breakdown

    2. Bacteria breakdown

    3. Viruses

    4. Cell and tissue necrosis

    5. Cell apoptosis

    6. Cellular release of exosomes

    7. Cellular release of siRNA

    8. Cellular release of virtosomes

    9. Parasite nucleic acids

    10. Mitochondria

    DNA

    1. Cellular release of transposons and retrotransposons

    2. Leukocyte surface DNA

    *mRNA, small-interfering (si)RNA, microRNA, RNAi,

    double-stranded RNA, nanoRNA, coding RNA, long

    noncoding RNA.

    Table 2. Possible origins of circulating nucleic acids in

    vascular plants

    DNA and RNAs*

    1. Bacteria breakdown and viruses

    2. Differentiation of tracheids

    3. Differentiation of vessels

    4. Differentiation of sieve elements

    5. Cellular release of siRNA

    6. Cellular release of virtosomes

    7. Mitochondria

    8. Parasites

    9. Epiphytes

    DNA

    10. Cellular release of transposons and retrotransposons

    *mRNA, small-interfering (si)RNA, microRNA, RNAi,

    double-stranded RNA, nanoRNA, coding RNA, long

    noncoding RNA.

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    for vascular plant systems through the angiosperma

    and man/animals through the eutheria for which most

    information is available. This will lead to a better

    understanding of the possible influence of CNAs on the

    F1 generations and, subsequently, evolution.

    POSSIBLE EPIGENETIC CHANGES ON CNAENTRY INTO EUTHERIAN SOMATIC CELLS

    Extracellular nucleic acid fragments from many

    sources (Table 1) are capable of entering other cells in

    the same organism and changing the biology of the

    recipient cells.

    Examples exist demonstrating the relative ease of

    cell uptake of nucleic acids circulating throughout the

    organism and the likely ability of such fragments to

    exert their effect through an epigenetic mechanism as

    suggested by Peters & Pretorius (2011). However, a

    genetic involvement cannot be ruled out in some casesbecause the experiments to test such situations have

    not been performed.

    The effect of the uptake of DNA and RNA on cell

    division can be seen in the studies of two mouse

    tumour cell lines, J774 and P497, and nonstimulated

    lymphocytes (Adams, Diaz & Gahan, 1997). The

    newly-synthesized DNARNAlipoprotein complex,

    the virtosomes (Gahan & Stroun, 2010b), released

    from the tumour cell lines stimulated nuclear DNA

    synthesis in approximately 60% of nonstimulated

    lymphocytes, whereas those from the nonstimulated

    lymphocytes and nondividing hepatocytes inhibited

    DNA synthesis in approximately 60% of tumour celllines. Similar reciprocal events occur between stimu-

    lated and nonstimulated lymphocytes (Viola-Magni

    et al., 2011), whereas nondividing hepatocyte virto-

    somes blocked the cell division of SW 480 tumour

    cells to differing degrees dependent upon the concen-

    tration of virtosomes employed (M. Garcia-Arranz,

    D. Garcia-Olmo, L. Vega, M. Stroun, P. B. Gahan,

    unpubl. data). Furthermore, glioblastoma-derived

    vesicles containing mRNA have been shown to stimu-

    late the proliferation of a human glioblastoma cell

    line (Skog et al., 2008).

    DNA released from X-irradiated Chinese hamster

    ovarian cells initiated similar cytological changes onentering non-irradiated cells (i.e. the transposition of

    chromosomal peri-centrimeric loci of homologous

    chromosomes from the peri-membrane sites to

    approach each other). In addition, nucleolar forming

    chromosome regions were activated (Ermakov et al.,

    2008). Radiation-induced bystander effects (RIBEs)

    can be defined as the responses of non-irradiated cells

    to the molecular events occurring in their irradiated

    neighbours having been observed both in vivo and in

    cultured human/animal cells (Klokov et al., 2004;

    Hamada et al., 2007; Hei et al., 2008; Matsumoto

    et al., 2011). When human tissues were irradiated

    locally, RIBEs were apparent in both adjacent areas

    and in cells distant from the beam. In some cases, an

    increased number of double-strand breaks have been

    found in the bystander cells together with DNA

    damage response, genomic instability, and decreasedcell viability (Lorimore & Wright, 2003; Trainor et al.,

    2012).

    Two different DNA fragments isolated from the

    blood of myocardial infarct patients have been found

    to alter the contraction frequency of neonatal rat

    ventricular myocytes in vitro. Thus, the AT-rich frag-

    ments of human satellite three tandem repeat (1 q12

    space region) increased the contraction rate, whereas

    the GC-rich fragments of rDNA decreased the con-

    traction rate (Bulicheva et al., 2008). During heart

    failure, mitochondrial DNA is released into heart

    tissue through cell breakdown and can kickstart the

    bodys natural response to infection, thus contributingto the process of heart failure. During heart failure,

    immune cells invade the heart leading to inflamma-

    tion and less efficient heart muscle, reducing its

    ability to pump blood around the body. Inflammation

    is usually only activated (e.g. on infection by bacteria

    or viruses). Because mitochondria are of bacterial

    origin, their DNA, resembling that of bacteria, initi-

    ates inflammation by triggering Toll-like receptor 9 in

    the immune cells (Oka et al., 2012).

    Immune responses have been recorded in addition

    to the classical Toll system initiation of the process

    (Hemmi et al., 2000; Dalpke et al., 2006). An allogenic

    TB lymphocyte co-operation in the presence of thesupernatant from the culture medium of T cells, pre-

    viously exposed to inactivated herpes simplex virus,

    synthesized an anti-herpetic antibody carrying some

    allotypic markers of the T cell donor. DNA purified

    from the supernatant of the T cell culture medium

    also had the same effect on B lymphocytes (Anker

    et al., 1980).

    In other experiments (Anker et al., 1984), nude

    mice were injected with DNA extracted from the DNA

    complex released by human T lymphocytes previously

    exposed to inactivated herpes or polioviruses. The

    serum from these mice, tested for its neutralizing

    activity, showed that mice synthesized anti-herpeticor anti-polio antibodies, respectively. The antibodies

    carried human allotypes, as shown through their neu-

    tralization by human anti-allotype sera.

    POSSIBLE GENETIC CHANGES ON CNAENTRY INTO EUTHERIAN SOMATIC CELLS

    In the examples of either DNA or RNA uptake by cells

    given above, the changes observed can most likely be

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    explained by epigenetic events. Nevertheless, some

    experiments imply that there is an integration of the

    DNA fragment into the genome and hence a genetic

    effect can be established. Indeed, this is one possible

    mechanism that has been suggested for the induc-

    tion of metastases (Garca-Olmo et al., 1999; 2000;

    Garcia-Olmo, Ruiz-Piueras & Garcia-Olmo 2004;Garcia-Olmo et al., 2010).

    Studies of the release of mutated Kras fragments of

    SW 480 cells showed them to be readily taken up by

    NIH 3T3 cells, leading to their transformation (Anker

    et al., 1994). Furthermore, NIH 3T3 cells were also

    transformed by mutated Kras sequences on culturing

    with the plasma from patients with Kras mutated

    colorectal tumours. These oncogenetically trans-

    formed 3T3 cells initiated carcinomas in NOD-SCID

    mice, with such tumours being found to contain the

    human mutated Kras sequence (Garcia-Olmo et al.,

    2010) that was also found free in the mouse blood. A

    similar outcome has been reported by Trejo-Becerrilet al. (2012) when employing the same experimental

    system as Garcia-Olmo et al. (2010). Additionally,

    Garcia-Olmo et al. (2012) also demonstrated that

    tumour DNA was found in the plasma during a 2-year

    follow-up period after surgical removal of the

    colorectal tumour from patients. This DNA also led to

    similar results with the same experimental system

    involving NIH 3T3 cells and NOD-SCID mice

    (Garcia-Olmo et al., 2012).

    Based upon data indicating that chromatin frag-

    ments possessing recombinagenic free ends were

    present in the plasma and serum, they could be

    exploited in gene replacement therapy. Small frag-ments were prepared of human chromatin from non-

    mutant cells and added to the culture medium of

    human breast cancer cells having a 47-bp deletion in

    the CASP 3 gene. Caspase 3 activity was restored in

    30% of the treated cells (Yakubov et al., 2007).

    The phagocytotic uptake of apoptotic bodies led to

    the transfer of genomic DNA to the nuclei of the

    recipient cells, with such DNA being stable over time

    (Holmgren et al., 1999). Further involvement of DNA

    uptake leading to tumorigenesis can be seen through

    experiments exploiting the phagocytosis of apoptotic

    bodies derived from H-rasV12- and human C-myc-

    transfected rat fibroblasts by p53-deficient fibroblastsin vitro. The transferred DNA was propagated in the

    recipient cells that also have been found to contain

    either rat chromosome(s) or rat and mouse fusion

    chromosomes in their nuclei (Bergsmedh et al., 2001).

    MECHANISMS OF RNA AND DNA UPTAKEBY EUTHERIAN CELLS

    On examining the mechanisms of eutherian cell CNA

    uptake, two aspects need consideration: (i) entry into

    the cytoplasm without CNA destruction and (ii) move-

    ment from the cytoplasm into the nucleus where it

    can act either epigenetically or be incorporated into a

    chromosome.

    ENTRY INTO THE CYTOPLASM

    Very few studies have been made on the mechanism

    of RNA uptake. Given that most RNA released from

    cells tends to be via exosomes, a likely explanation for

    the uptake of exosomal RNA is by endocytosis. This is

    supported by studies in plants on small-interfering

    (si)RNA in which the endolysosomal system is consid-

    ered to be involved (Gibbings & Voinnet, 2010). Nev-

    ertheless, in Drosophila cells, dsRNA uptake from the

    environment requires receptor-mediated endocytosis

    (Saleh et al., 2006). Lee et al. (2009) have linked gene

    silencing by microRNAs and siRNAs to endosomal

    trafficking.

    The molecular mechanisms of DNA uptake in mam-malian cells are poorly understood (Wittrup et al.,

    2007). However, available studies indicate that the

    uptake of virtosomal DNA and other DNAs is more

    complicated than that proposed above for RNA.

    Although various sources of DNA such as bacterial

    and mitochondrial DNA, have been shown to enter

    cells by the Toll receptor system (Hemmi et al., 2000,

    2002; Dalpke et al., 2006; Oka et al., 2012) there is

    every reason to assume that DNAs can enter cells by

    using alternative mechanisms. The question arises as

    to how these mechanisms use processes that avoid the

    lysosomal digestive system. This is not clear with

    respect to the phagocytic uptake of apoptoticbodies (Bergsmedh et al., 2001). The relatively few

    studies that have been performed on mouse skeletal

    muscle (Wolff et al., 1990), human keratinocytes

    (Basner-Tschakarjan et al., 2004), J774 cells

    (Trombone et al., 2007), and murine GEnC cells

    (Haegle et al., 2009) indicated a variety of methods

    involving T tubules (Wolff et al., 1990), caveoli (Wolff

    et al., 1990; Zamecnik et al., 1994) and endosomes

    (Yakubov et al., 1989; Trombone et al., 2007; Haegle

    et al., 2009). In particular, the uptake of naked

    plasmid DNA via endosomes has been shown to result

    in the blocking of endosomal acidification, thus avoid-

    ing activation of the hydrolases present and henceDNA digestion (Trombone et al., 2007). Such DNA

    remains in the endosomes to be transported to the

    nuclear membrane. The authors suggest that the

    DNA is not released from the vesicles but may be

    transferred directly into the nucleus. Endocytosis

    and pinocytosis have also been implicated by Wagner

    et al. (1990), Luo & Saltzman (2000) and Basner-

    Tschakarjan et al. (2004). This may be a mechanism

    by which the virtosomes enter the cell, the virtosome-

    containing endosomes avoiding the lysosomal system.

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    Caveoli have been suggested as an alternative entry

    mechanism for nucleic acids to avoid lysosomal diges-

    tion via potocytosis. There are at least four different

    caveoli membrane traffic patterns with at least four

    locations for caveoli ligands (Anderson et al., 1992;

    Mineo & Anderson, 2001). However, there is some

    evidence that the caveoli may eventually link withthe lysosomal system (Kiss & Botos, 2009; Kiss,

    2012).

    Alternative mechanisms considered in a number of

    studies have demonstrated that histones H1 (Fritz

    et al., 1996; Budker et al., 1997; Zaitsev et al., 1997;

    Bottger et al., 1998; Haberland et al., 2000; Balicki

    et al., 2002), H2A (Singh & Rigby, 1996; Balicki &

    Beutler, 1997; Balicki et al., 2000), and H3 and H4

    (Demirhan et al., 1998; Hariton-Gazal et al., 2003) are

    effective mediators of transfection. The postulated

    mechanisms by which histone H1 increases gene

    transfection are through DNA condensation, DNase

    protection, and the mediation of nuclear import. Inthese studies, histone H1 was considered to be the

    subclass of histones that mediates efficient gene

    transfer in the presence of chloroquine. Balicki et al.

    (2002) have further determined that DNA-delivery

    activity can be mediated by two mechanisms: electro-

    statically driven DNA binding and condensation by

    histone and nuclear import of these histone H2ADNA

    polyplexes via nuclear localization signals in the

    protein. More recently, Peters & Pretorius (2011) have

    also suggested that, because histones can increase the

    permeability of membranes by ionic interaction, this

    mechanism could aid complexes, such nucleosomes

    released by apoptosis, to enter recipient cells. It hasbeen suggested that virtosomes could enter cells by

    one of the mechanisms described above (Gahan &

    Stroun, 2010b). Virtosomes are comprised of DNA,

    RNA and glycolipoprotein and do not appear to either

    pick up or lose membrane material on either leaving

    or entering cells. Therefore, it is possible that a

    mechanism similar to that exploited by histones could

    lead to the direct uptake of virtosomes through an

    ionic interaction between a part of the glycoli-

    poprotein present and the cell membrane.

    This proposition is further supported by the work of

    Wittrup et al. (2007) who showed that naked plasmid

    DNA uptake does occur via proteoglycan-dependentmacropinocytosis. Such data challenge the concept

    involving a specific DNA-internalizing receptor.

    NUCLEAR UPTAKE OF NUCLEIC ACIDS

    Having entered the cytoplasm, the nucleic acid must

    enter the nucleus if it is to have either a genetic or an

    epigenetic effect. The nuclear envelope contains

    nuclear pores with a passive transport limit of 70 kDa

    molecular mass or 10 nm diameter (Melchior &

    Gerace, 1995). Hence, the nuclear membrane presents

    a considerable barrier to the entry of nucleic acids.

    Nevertheless, DNA can be seen to enter the nucleus of

    chick embryo fibroblasts (Adams & Macintosh, 1985;

    Zamecnik et al., 1994), HeLa cells (Zamecnik et al.,

    1994), L29 mouse fibroblasts and Krebs 2 ascites

    carcinoma cells (Yakubov et al., 1989). Furthermore,the nuclear sites occupied by the 3H-oligonucleotides

    used by Zamecnik et al. (1994) essentially differed

    from those occupied by the incorporated 3H-

    thymidine as observed by transmission electron

    microscopy autoradiography. The mechanism by

    which DNA enters the nucleus is not clear. It is

    known that, for mediated active transport through

    the nuclear pore complex, nuclear proteins require a

    nuclear localization signal that contains basic amino

    acids and can be recognized by cytosolic factors (Jans

    & Hubner, 1996). For this to occur, the nuclear pore

    can expand to approximately 30 nm (Dworetzky,

    Lanford & Feldherr, 1988). For example, this can beshown to function experimentally by the coupling of

    100 nuclear localization signal peptides/kilobase pair

    of DNA for the nuclear delivery of the DNA

    (Sebestyen et al., 1998).

    RNA movement from cytoplasm to nucleus appears

    to involve specific proteins. Thus, in the case of

    siRNAs, there is the necessity for them to be linked to

    an argonaut protein for transfer to the nucleus (e.g.

    NRDE-3 in Caenorhabditis elegans) (Guang et al.,

    2008).

    MITOCHONDRIAL RELEASE AND UPTAKEOF NUCLEIC ACIDS

    Little is known about the release of DNA from animal

    mitochondria, other than through cell death, and its

    uptake into mitochondria has not been as well studied

    for animals as it has for plants. A mitochondrial

    permeability transition pore complex existing in asso-

    ciation with the inner mitochondrial membrane has

    been well studied (Bernardi, 2013). Although it

    permits the passage of molecules of up to 1500 Da,

    currently there is no evidence for a similar passage of

    DNA to that seen with plant mitochondria (see

    below).

    NUCLEIC ACID UPTAKE INTO EUTHERIANOVA AND SPERM

    The information is less substantiated for man/

    animals than for plants but, nevertheless, it leads to

    the strong possibility of the influence of CNAs on the

    progeny. The earliest experiments indicating the pos-

    sibility that circulating DNA might be incorporated

    into ova and/or sperm of the recipient organism came

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    from the initial studies by Benoit et al. during the

    1950s and 1960s on the pekin duck. DNA isolated

    from the nuclei of genital organs of khaki ducks

    (greenishblack beaks) was injected into nine females

    and three males of the pekin (yellow beak) variety.

    The progeny showed a marked reduction in weight,

    modified feathers and carriage. Three generationsderived by either inter se matings or from back-

    crosses to pekins yielded several hundred female

    descendents. Of these, 18 had bluish markings on the

    beaks from the age of 4 months, being more pro-

    nounced in the breeding season. Treated male parents

    and several of their male progeny developed

    draughts board-like markings on the web of the foot

    (Benoit et al., 1960, 1966). These results have often

    been criticized because there was no attempt to

    repeat the experiments and, given the methods avail-

    able at the time, there was the possibility that the

    DNA preparation was impure. However, subsequent

    work using purified and labelled DNA has tended tosupport the possibility of the transfer of DNA to the

    gonads. Moreover, the introduction of DNA fragments

    into sperm forms the basis of the method for achiev-

    ing genetic modifications in domestic animals

    (Brackett et al., 1971; Niu & Liang, 2008).

    OVA

    The idea that circulating DNA might have ready

    access to the female gonads is supported by the early

    experiments of Ledoux & Charles (1970) when, within

    1 h of injecting mice intravenously with 3H-DNA fromEscherichia coli, the 3H-DNA was incorporated in

    ovarian tissues as confirmed by both CsCl centrifu-

    gation and autoradiography; in the latter case, the

    oocyte nuclei were labelled. Little labelling appeared

    to be retained by the uterine and vaginal tissues.

    However, intravenous injection of 3H-DNA into preg-

    nant mice led to labelling of the embryos especially in

    the early stages of development.

    Liu (2006) identified 50 reports on blood transfu-

    sion experiments (parabiosis), performed between

    1950 and 1979, and involving a variety of birds, pigs,

    and rabbits of which 45 yielded positive results and

    only five obtained negative results. A successfulexample of parabiosis concerns an experiment to

    investigate heritable changes in a 50-day old Angora

    female parabiosed for 36 days with a Flanders female

    of similar age (Boriachok-Nizhnik, 1951). One month

    after separation, the Angora female was mated to an

    Angora male, yielding seven offspring of which only

    one had Angora long hair, with the other six having

    Flanders-like short hair. The young rabbits had a

    mean weight of 3020 g at 5 months compared to

    2330 g for normal Angora rabbits under similar con-

    ditions. This implied that DNA fragments circulating

    in plasma and serum can influence ova in the experi-

    mental animals employed.

    Subsequently, there has been little work on the

    introduction of DNA into ovaries/ova (Guerra,

    Carballada & Esponda, 2005; Niu & Liang, 2008).

    Although chronic hepatitis B virus has been shown toinfect ova at different stages of development (Ye et al.,

    2005), the transfection of ovarian cells is considered

    to be difficult. Yang et al. (2007) did manage to

    transfect ovarian cells with enhanced green fluores-

    cent protein (EGFP)-expressing plasmid (pIRES-

    EGFP) by direct injection into the ovaries of fertile

    mice. Following natural fertilization, healthy trans-

    genic mice were obtained, with the introduced EGFP

    gene being inherited by 64.9% of the F1 offspring and

    with stable transmission to 66.94% of the F2 progeny.

    The foreign genes were both integrated into the

    genome (frequency of 85.71% by FISH analysis) and

    translated into the functional protein on transferringto the subsequent generation. Hamster oocytes

    incubated in vitro with human papilloma viral DNA

    passively took up exogenous DNA fragments possibly

    by either endocytosis or pinocytosis (Wagner et al.,

    1990; Luo & Saltzman, 2000). Transfection studies

    directly using the bloodstream to carry DNA to the

    oocytes in mouse ovaries have proved successful

    (Tsukamoto et al., 1995) as demonstrated by the

    modified offspring.

    Given that follicles housing the primary oocytes are

    supplied by peripheral blood capillaries, CNAs need

    to traverse the various follicular layers between the

    blood supply and the primary oocyte. Nevertheless,there are mechanisms by which CNAs are found to be

    present in the primary oocytes (Wagner et al., 1990;

    Tsukamoto et al., 1995; Luo & Saltzman, 2000; Ye

    et al., 2005; Yang et al., 2007). Although there is a

    very low probability that a transformed primary

    oocyte will be fertilized by a transformed sperm, there

    is a greater probability that a transformed primary

    oocyte could be fertilized by a nontransformed sperm,

    or vice versa. This is especially so for invertebrates or

    vertebrates that lay their eggs in large numbers as

    opposed to when the eggs are laid singly. Hence, for

    eutherians, with some having a long reproductive life,

    primary oocytes may be released in either smallnumbers or singly, thus limiting the chances of the

    fertilization of a transformed primary oocyte.

    In addition, the primary oocyte chromosomes will

    be arrested at diplotene of the first meiotic division,

    the dictyate phase, and will remain so until their

    release from the follicle and fertilization by the sperm

    (Snell, 1972). Hence, there appears to be only a short

    window of time in which the integration of circulating

    DNA fragments into the oocyte nucleus can occur (i.e.

    at around the time of fertilization when the meiotic

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    block is released). Consequently, it is more likely that

    any transformation of the primary oocytes by circu-

    lating DNA fragments will need to occur during

    embryogenesis when they must enter the chromo-

    somes of cells involved in the production of oogonia

    that (through successive mitoses) form the primary

    oocytes.For example, in the case of man, there is only a

    small chance of a transformed primary oocyte being

    selected in the human female. Not all of the approxi-

    mately 70 000 primary oocytes present in the

    3-month-old embryo are likely to be transformed by

    CNAs prior to being reduced through atresia to

    approximately 40 000 at puberty. In addition to their

    continuing to atrese during the reproductive lifetime

    of the female, only some 400 primary oocytes will be

    exploited during the female reproductive period, not

    all of which may have been transformed. Of these,

    only a very small number will be fertilized.

    Although preliminary studies have permitted theisolation of putative oocyte stem cells from reproduc-

    tive human and mouse ovaries (Johnson et al., 2004;

    Zhou et al., 2009; White et al., 2012), it is not clear as

    to how much of an active role they play in vivo in

    adult egg production.

    SPERM

    Sperm present a different situation to ovaries and

    ova. Recent research has involved sperm as gene

    carriers for the production of transgenic animals

    (Brackett et al., 1971; Chang et al., 1999; Smith &

    Spadafora, 2005; Niu & Liang, 2008). In this situa-tion, direct DNA uptake by sperm appears to be

    limited by the presence of DNAase and DNA-binding

    proteins in the seminal fluid, possibly released by

    the prostate (Carballada & Esponada, 2001; Lanes,

    Sampaio & Marins, 2009). However, if the sperm are

    washed well, they are capable of taking up DNA

    directly even into the nucleus and the mitochondria

    (Brackett et al., 1971; Spadofora, 1998; Guerra et al.,

    2005; Vasicek et al., 2007; Niu & Liang, 2008). An

    alternative approach to introduce DNA into sperm

    has been by direct injection of DNA encapsulated in

    liposomes into the testes via the scrotum (Chang

    et al., 1999). This exogenous DNA appears to berapidly transported to the epididymal ducts via the

    rete testis and efferent ducts to be incorporated by

    epithelial cells of the epididymus and epididymal

    spermatozoa (Sato, Ishikawa & Kimura, 2002).

    Sperm cells incubated with human poliovirus RNA

    take up the exogenous RNA molecules and internalize

    them in the nuclei. The poliovirus RNA is reverse-

    transcribed in coding DNA (cDNA) fragments that

    can be visualized on sperm nuclear scaffolds by

    immunogold electron microscopy. The poliovirus

    RNA-challenged spermatozoa are able, subsequently,

    to transfer the retro-transcribed cDNA molecules into

    eggs during in vitro fertilization (Giordano et al.,

    2000).

    As with oocytes, sperm uptake of CNA fragments

    would preferably occur during spermatogenesis when

    cells will be more amenable to uptake. In the vastmajority of cases where there is only one or very few

    reproductive periods in the year, all sperm will be

    released at once, thus giving rise to the possibility of

    any transformed sperm being able to fertilize a(n)

    (un)transformed oocyte. However, in man, when there

    is continuous sperm production, there will be a con-

    tinual turnover of sperm. The experimentally deter-

    mined time from sperm production to ejaculation in

    healthy men is 4276 days (Missel et al., 2009).

    Hence, given the high turnover rate of sperm and the

    fact that, in man, up to 100 millions of sperm are

    released at each ejaculation, there is a very low

    probability of a CNA transformed sperm fertilizing aCNA (un)transformed oocyte.

    CNA UPTAKE IN EUTHERIA ANDTHEIR PROGENY

    Both sperm and ova appear to be able to take up

    nucleic acid fragments and, in the case of sperm,

    transfer them to the ova. However, the nucleic acid

    fragments already present in the bloodstream,

    although having access to sperm and ova and hence

    incorporation into chromosomes, have not so far been

    demonstrated to have a major impact in terms ofmodifying the subsequent generations of such indi-

    viduals. One reason is that eukaryoteeukaryote

    transfer of nuclear genes is underestimated for various

    reasons, including the fact that many of the acquired

    genes are existing homologues rather than genes intro-

    ducing new functions (Keeling & Palmer, 2008).

    One way in which genes capable of modifying

    organisms could enter the bloodstream would be from

    an external source through either a bacterial/viral

    infection or parasitic infections by, for example,

    protozoa, platyhelminths, nematodes, annelids, and

    insects. Currently, there is no evidence in support of

    this idea (Brindley et al., 2009) in part because nostudies appear to have examined such a possibility.

    Moreover, Beck et al. (2009) indicated that, in healthy

    human individuals, no more than approximately 3%

    of the circulating DNA is of nonhost origin and it is

    not clear by how much such additional foreign DNA

    could be present.

    Nevertheless, both oocytes and sperm can be sup-

    plied with CNAs and so take up nucleic acid frag-

    ments. From the current evidence, sperm appear to be

    the more likely carriers of such fragments that permit

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    the genetic changes necessary to affect the F1 genera-

    tion. Hence, although there are mechanisms facilitat-

    ing the nucleic acids present in the circulatory system

    to make a strong impact on the F1 generation, to date,

    there is little evidence that this is actually the case.

    This could explain why there are so few examples of

    horizontally-transferred genes being incorporatedinto gametes of eutheria and other higher animal

    systems rather than into their somatic cells. This also

    has relevance as to why, when genetically modified

    DNA can pass from the gut to the circulatory system,

    there has been no clear demonstration of the effects of

    such DNA on the offspring of individuals eating

    genetically modified food.

    NUCLEIC ACID UPTAKE BY VASCULARPLANTS AND THEIR PROGENY

    There appears to be a stronger case for the modifica-

    tion of the progeny in plants on the uptake of CNAs

    (Table 2) because plants develop floral reproductive

    systems from vegetative sources on each reproductive

    occasion rather than having a continuous germ cell

    line as in many animals. Hence, there is ample oppor-

    tunity for any CNA to integrate into the genome of

    the vegetative cells that will ultimately be involved in

    the formation of gametes. Modification of the genome

    by siRNA generated internally has been considered

    as a possible mechanism for changing the genome

    expression in the F1 generation through incorporation

    into primary meristem cells that are the precursors

    of the reproductive organs (Melnyk, Molnar &

    Baulcombe, 2011). However, this is self-generated

    nucleic acid that will have an epigenetic effect rather

    than a genetic one.

    GRAFT HYBRIDS: EVIDENCE OFSPONTANEOUS TRANSFER OF NUCLEIC

    ACIDS BETWEEN STOCK AND SCION

    Initial studies on the grafting of plants by Darwin

    (1868) and Mitchurin (1949) demonstrated the

    passage of genetically retained characters from the

    stock (mentor) to the scion (pupil) and, subsequently,

    such results were repeated in several studies (Liu,2006). These include those of Burbank (191415) in

    the USA with plum and Glouchtchenko (1948) in the

    USSR with tomato. There were many earlier reports

    of such experiments from China, although these were

    not so well documented and, subsequently, from the

    USSR (Liu, 2006).

    Detailed grafting experiments were repeated in

    Switzerland after discussion with Glouchtchenko

    (Stroun, 1962; Stroun et al., 1963a) using Solanum

    nigrum and two different varieties of Solanum

    melanogena. It is important to note that these graft-

    ing experiments were precursors to the development

    of the idea for circulation of CNAs in higher organ-

    isms, leading to their current use in the non-invasive,

    early detection of foetal abnormalities and certain

    diseases, as well as for monitoring treatment and

    predicting clinical outcomes (Gahan, 2012, 2013).Their experiments consisted of grafting plants of

    different varieties (S. melongena and S. nigrum) onto

    one another. Either the stock or the scion was

    deprived of all growing leaves and thus was subjected

    to the influence of the metabolism of the leaf-bearing

    section. The descendents of the underprivileged

    partner of the scion (the pupil) sometimes demon-

    strated genetically modified characteristics that were

    often similar to those of the stock (the mentor).

    However, the ways in which these modifications

    appeared and were transmitted to the offspring were

    often very different from those observed by sexual

    crossing of the two varieties: (1) some modifications inthe pupil plant were similar to the characteristics of

    the mentor plant; (2) characteristics not observed in

    the mentor plant appeared in the pupil plant; (3) not

    all of the modified pupil plants acquired the same

    characteristics of the mentor plant, with some dem-

    onstrating only one characteristic, others demonstrat-

    ing several characteristics, or others demonstrating

    all of the characteristics of the mentor; (4) during

    segregation, some recessive parents produced off-

    spring with dominant features; (5) segregation

    occurred as early as the F1 generation of the modified

    plants contrary to the expectation in sexual crossing

    where segregation appears in the F2 generation; and(6) linked characteristics in the mentor plant some-

    times appeared individually in the pupil plant and its

    offspring. Similar results were obtained through

    grafting between S. melanogena and S. nigrum.

    The involvement of some kind of plasmic episomes

    could be ruled out because (1) an accidental sex-

    ual crossing can be absolutely excluded in view

    of the aberrant segregation observed and that

    S. melanogena and S. nigrum are not sexually com-

    patible; (2) the number of alterations argues strongly

    against the possibility of either mutations or specific

    circulating viruses; and (3) the modifications appear-

    ing in the pupil plants are carried by both the maleand the female gametes, as demonstrated by the

    backcrossing of the modified plants. Alternative pos-

    sibilities were offered to relate these unorthodox

    results to classical genetics, namely:

    1. Movement of genetic information from the mentor

    plant to the pupil plant appeared to be the best

    explanation for these phenomena and the possible

    induction of apparent epigenetic modifications in

    the fruit borne by the pupil.

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    2. In addition, given the appearance of the modifica-

    tions in the F1 generation, the genetic transforma-

    tion could be a result of the migration of DNA

    released by the mentor cells to the somatic and

    reproductive cells of the pupil plant.

    At the same time, Yagishita (1961a, b) performedsimilar experiments using Capsicum baccatum and

    Capsicum annuum and obtained similar results,

    including the non-Mendelian segregation of the

    new features in the progeny of the grafts. In addi-

    tion, Hirata (1979, 1980, 1986) also worked on

    S. melongena, obtaining similar results to those of

    Stroun (1962) and Stroun et al. (1963a). They arrived

    at similar conclusions in that there was a movement

    of genetic material between the stock and the scion,

    although Hirata et al. (2001) suggested that this was

    through the action of retro-transposons. A similar

    explanation was offered for the results obtained

    through graft transformation in C. annuum (Hirataet al., 2003). Using male sterile petunia for stocks and

    normal fertile petunia for scions, graft-induced

    genetic variation was also demonstrated by Frankel

    (1954, 1962). The results showed the transfer of male

    sterility from the stock to the progenies of the scion.

    This is of especial interest because male sterility

    genes are carried by the mitochondria.

    Non-Mendelian inheritance was also reported for

    grafts of C. annuum by Kasahara and co-workers

    (cited by Liu, 2006), with such data being confirmed on

    the exact repetition of these experiments (Ohta &

    Choung, 1975; Liu, 2006). Subsequently, using the

    random amplified polymorphic DNA (RAPD) analysison grafts between C. baccatum and C. annuum,

    Shiiguchi et al. (2004) demonstrated that the sequence

    of the capsanthin-capsorubin synthase gene cloned

    from the progeny was identical to that cloned from the

    stock, although different from the scion in the Hap site.

    This was interpreted as indicating that a transforma-

    tional event could have occurred via the graft

    (Shiiguchi et al., 2004). Zhang et al. (2002), working

    with seedlings ofVigna radiata L grafted onto the stem

    of Ipomea batatus L, also found that subsequent gen-

    erations derived from seeds selfed on the scion had

    distinct genetic variations but not in those from seeds

    of the stock. Moreover, there was no restriction frag-ment length polymorphism in the cytoplasmic DNA

    between the original scion and the variation. However,

    a significant difference between the scion and variation

    was recognized by the RAPD technique. There was no

    evidence that indicated gene transformation from

    stock to scion. Thus, preliminary evidence was

    obtained indicating the transfer of genes via the graft

    with expression in a subsequent generation.

    As shown in Table 2, DNA (and RNA) could be

    derived from a variety of sources in plants. It can be

    expected that some nuclear material will be present

    in the circulatory system through the loss of nuclei

    from xylem vessels, tracheids, and phloem sieve ele-

    ments on differentiation (Esau, 1953; Fahn, 1982).

    Ohta (1991) reported that chromatin masses were

    observed to move through the cell walls and inter-

    cellular spaces from the lignifying cells of the stockand into the vascular system from where it was

    suggested to move to the scion and thus cause

    transformation in the fast-dividing scion floral

    primordia.

    It is possible that whole nuclei may be involved

    because nuclei appear to be retained at a late stage in

    xylem differentiation (Phillips & Dodds, 1977; Gahan

    et al., 2003a). However, because apoptosis is not

    involved in the eventual loss of such nuclei (Fukuda,

    1996; Gahan et al., 2003a), it is unlikely that such

    released whole nuclei will pass across the intact cell

    walls of the apical meristem cells. It will require a

    disintegration of such nuclei after release from thedifferentiating vascular cells to result in DNA frag-

    ments that can enter the meristem cells.

    DNA movement was found when cut shoots of

    Lycopersicon esculentum were fed with 3H-thymidine,

    re-rooted, and allowed to grow on. There was intense

    DNA labelling in the collenchyma at the base of the

    stem that was not a result of DNA synthesis in

    preparation for mitosis. Over the subsequent 14

    weeks, this label was slowly lost (Hurst, Gahan &

    Snellen, 1973; Hurst & Gahan, 1975). Some of the

    radioactive DNA leaving the collechymal nuclei of

    tomato shoots at the base of the stem was found in

    the apical meristem. This appeared to be a result ofthe movement of pieces of DNA in the plant and not

    to breakdown products (nucleotides) that would have

    been distributed throughout the plant and not be

    detectable by autoradiography in any tissue. Prelimi-

    nary results from similar experiments in which

    shoots from nonradioactive plants were grafted

    onto the stock of the plants fed with 3H-thymidine

    showed occasional labelling of meristem cells of

    the grafts (P. Gahan, unpubl. data). That DNA can

    move throughout the plant has been demonstrated

    both biochemically (Stroun et al., 1966, 1967) and

    autoradiographically (Gahan, Anker & Stroun, 1973).

    Moreover, when E. coli DNA carrying three markergenes (GUS, NPT II, and BAR genes) was fed to cut

    shoots of Solanum aviculare and the stems re-rooted

    and allowed to grow on, all three genes were found to

    express throughout the plants. Importantly, the genes

    were expressed also in the F1 generation, implying

    that the genes had been integrated into chromosomes

    of the apical meristem cells forming the floral tissues

    (Gahan et al., 2003b). Hence, there is every reason to

    suggest that DNA can move through the vascular

    tissue from the stock to the graft as also proposed

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    by Stroun (1962) and Ohta (1991). By contrast to

    the evidence of graft hybridization given above,

    Stegmann & Bock (2009) showed that genetic mate-

    rial is transferred between tobacco plants across graft

    junctions. The exchange of transgenic markers was

    demonstrated to occur in both directions, although

    this involved the transfer of plastid DNA, rather thannuclear DNA, between cells. This was limited to the

    site of the graft. The data obtained did not support

    the concept of graft hybridization because it would be

    analogous to sexual hybridization.

    The passage of RNAs from the stock into scions has

    been discussed in a review of the long distance trans-

    port of RNA through phloem (Kehr & Buhtz, 2008).

    Such RNAs can move through the phloem from the

    stock plant to the scion where they could be detected

    in the apical tissues, as well induce phenotypic

    changes in the scions in some cases. Such RNA trans-

    port was shown to occur with: (1) CmNACP mRNA

    between pumpkin and cucumber (Ruiz-Medrano,Xoconostle-Czares & Lucas, 1999); (2) the transcript

    of a KNOTTED1-like homeobox gene in tomato (Kim

    et al., 2001); (3) BEL1-like transcription factor in

    potato (Banerjee et al., 2006); and (4) GIBBERELLIC

    ACID INSENSITIVE (GAI) gene in Cucurbita

    maxima (Haywood et al., 2005). However, although

    Arabidopsis GAI RNAs could traffic into non-

    transgenic scion shoot apices and floral organs, they

    were restricted from developing fruits, pedicels, and

    peduncles (Haywood et al., 2005).

    Hence, given the present information on RNA

    movement from stock to scion, there is little evidence

    of such RNAs inducing heritable changes in theprogeny of the scion. However, it is possible that

    siRNA can pass from the stock to the scion because

    such movement has been found across the junction

    between semiparasitic Triphysaria and its host

    (Tomilov et al., 2008). This is proposed to move

    symplastically between the host and the parasite

    (Vaughn, 2003). If this siRNA crosses the graft

    junction, it would have to pass through any

    plasmodesmata formed between the stock and scion.

    It has been suggested that there are two major path-

    ways for the movement of siRNA: locally via the

    plasmodesmata and long distance via the phloem

    (Melnyk et al., 2011). Because no RNA is normallyfound in the xylem flow, it is difficult to accept that

    the siRNA in the recipient plant could act other than

    locally because the siRNA is unlikely to move

    upwards via the phloem transport system.

    PARASITIC/EPIPHYTIC PLANTS/HOSTGENE MOVEMENT

    Clearly, the mechanism by which circulating nucleic

    acids could move to the progeny of an individual plant

    is ever-present. However, grafting is a man-made

    process and is very unlikely to occur in the wild.

    Nevertheless, there are attachments found between

    host and parasitic plants that may be considered to be

    similar to grafts in that they could permit gene

    exchanges between the host and parasite in both

    directions. Indeed, Bergthorsson et al. (2003, 2004)and Bock (2010) suggested that HGT is particularly

    prevalent between organisms that are either inti-

    mately associated or establish, at least occasionally,

    cellcell contacts (i.e. in either an epiphytic or a

    parasitic relationship). In line with this approach is

    the HGT of part of the mitochondrial genome of the

    endoparasitic plant, with Rafflesia being acquired

    from their obligate host Tetrastigma (Davis &

    Wurdack, 2004), whereas part of the mitochondrial

    genome of Phaseolus appears to have come from the

    chloroplast of an, as yet, unidentified non-eudicot

    plant (Woloszynska et al., 2004).

    Bergthorsson et al. (2004) have listed some twentygenes found in the angiosperm Amborella that have

    been derived primarily from eudicots and bryophytes.

    Species of the parasitic broomrape genus Phelipanche

    have two copies of the plastid ribosomal gene rps2,

    one of which corresponds to a gene, apparently hori-

    zontally acquired, from the related broomrape genus

    Orobanche. Because the donor and the recipient

    plants are both parasitic plants, it is possible that the

    exchange of genetic material could have occurred via

    a common host (Park et al., 2007). Similarly, three

    species of plantain have a normally functioning copy

    of the mitochondrial apt1 gene together with a second

    defective copy that strongly resembles the apt1 genepresent in Cuscuta (Mower et al., 2010). Phloem-

    mobile mRNAs are also considered to traffic from the

    host, Lycopersicon esculentum Mill., to the plant para-

    site Cuscuta pentagona Engelm (Roney, Khatibi &

    Westwood, 2007).

    In addition, there has been HGT of a gene of

    unknown function from Sorghum bicolor to the

    nucleus of the parasitic plant Striga hermonthica

    (Yoshida et al., 2010). There are also indications

    that two mitochondrial gene regions of the fern

    Botrychium virginianum (L.) Sw. may have originated

    from the root-parasitic Loranthaceae possibly by HGT

    (Davis et al., 2005).An hemiparasitic plant such as Triphysaria

    has been shown to take up siRNA from its host

    plant (e.g. lettuce) (Tomilov et al., 2008), probably

    symplastically between the two species (Vaughn,

    2003).

    Thus, the CNAs present in vascular plants appear

    to include genes from parasitic and epihytic plants so

    presenting HGT via a relatively simple mechanism

    of circulation and incorporation into vegetative cells

    predetermined to form gametes.

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    RELEASE AND UPTAKE OF DNABY PLANT MITOCHONDRIA

    Many DNA sequences appear to be exchanged

    between plant mitochondria of especially parasitic

    plants and their hosts. Although little is known about

    the release of DNA from plant mitochondria, otherthan through cell death, the uptake of DNA into plant

    mitochondria has been well studied.

    In higher plants, especially angiosperms, mito-

    chondrial genomes tend to be much larger

    (300800 kb) than the DNA of animal or fungal mito-

    chondria (1685 kb) yet only 1118% corresponds to

    protein or structural RNA genes, whereas 5% or more

    appears to have originated from plastids, nuclei or

    viruses; probably approximately half has no recogniz-

    able function and origin (Marienfeld, Unseld &

    Brennicke, 1999; Kubo et al., 2000). Koulintchenko,

    Konstantinov & Dietrich (2003) have demonstrated a

    mechanism for DNA entry into plant mitochondria.They proposed the existence of an active, trans-

    membrane potential-dependent mechanism of DNA

    uptake to be involved. They showed that, although

    the process was restricted to dsDNA, there was no

    obvious sequence specificity, the most efficient uptake

    occurring with linear fragments up to a few kilobase

    pairs in size. The uptake process appears to be active

    and to involve a voltage-dependent anion channel

    with an adenine nucleotide translocator. These repre-

    sent the core components of the animal mitochondrial

    permeability transition pore complex associated with

    the inner mitochondrial membrane (see above).

    However, there is no reliance on known mitochondrialmembrane permeabilization processes. Interestingly,

    the imported DNA was transcribed. The uptake

    mechanism proposed by Koulintchenko, Konstantinov

    & Dietrich (2003) could explain the facility of the

    simultaneous transfer of three mitochondrial genes,

    atp1, atp6 and matR, from the Cuscuta gronovii

    genome to that of the host Plantago coronopus

    mitochondrial genome in the form of one piece of

    DNA (Mower et al., 2010). In addition, based on the

    data concerning the easy mobility of mitochondrial

    DNA fragments between parasitic plants and their

    hosts, Hao et al. (2010) have proposed a model in

    which intra- and inter-organellar gene transfer/recombination are important in the generation of

    mitochondrial genetic diversity. Archibald & Richards

    (2010) have discussed the impact and implications of

    such a model. However, the modified mitochondria

    would need to be present in plant egg cells to have an

    impact on the F1 generation.

    The mitochondrial permeability transition pore

    complex exists in animal mitochondria where it has

    been well studied (Bernardi, 2013). Although it

    permits the passage of molecules of up to 1500 Da,

    currently, there is no evidence for a similar passage of

    DNA to that seen with plant mitochondria.

    PLANT PATHOGENS

    Plants are subject to many pathogen attacks, with the

    major groups involving viruses, bacteria and fungi, aswell as insects and nematodes. At present, although

    there is little evidence of HGT from prokaryotes to

    plants as a result, perhaps, of there being little work

    in this field (Keeling & Palmer, 2008), genes for

    multiple enzymes for carotenoid biosynthesis appear-

    ing to have been transferred from fungi to aphids

    (Moran & Jarvik, (2010) and tobacco to bacteria

    (Pontoroli et al. 2009; Demanche et al., 2011). In

    addition, there are few reports of HGT from

    the pathogens to the host plants (Nielsen et al.,

    1998), again, because this field has not been fully

    investigated.

    It is also possible for the spread of RNA silencingfrom a plant to an invertebrate and fungal pathogens

    (Huang et al., 2006; Baum et al., 2007; Mao et al.,

    2007; Nowara et al., 2010; Tinoco et al., 2010). The

    assumption has been made that siRNAs are trans-

    ferred between organisms, although it cannot be

    ruled out that siRNA precursors are the mobile form

    that is subsequently processed in the host. When

    sucking insects and nematodes feed, the cells are

    broken so that active siRNA is involved (Melnyk

    et al., 2011). This appears to be the case for

    Coleoptera when the RNA silencing signal remains

    functional.

    As is the case with the animal systems, the mecha-nisms by which CNAs in plants can integrate into the

    germ cells is present and there are examples to show

    that such nucleic acids can pass to the F1 generations.

    Furthermore, not only is there is evidence for HGT

    from prokaryotes to eukaryotic plants, but also there

    is some evidence for HGT between eukaryotic plants.

    Hence, not only are the potential mechanisms for

    gene movement and inheritance both present in

    plants, but also preliminary studies indicate that

    CNAs in plants could result in an impact on plant

    evolution.

    Thus, the preliminary studies of HGT (1) between

    bacteria and plant parasitic nematodes showing thetransfer of genes involved with carbohydrate metabo-

    lism to improve the nematodes plant invasive prop-

    erties (Scholl et al., 2003) and (2) between transgenic

    plants and soil bacteria (Nielsen et al., 1998), as well

    as (3) the natural movement of genes between differ-

    ent plant species and, for example, prokaryotes and

    fungi into plants, can occur by gene transfer medi-

    ated by, for example, micro-organisms, parasites,

    viruses or mites and by direct cell-to-cell transfer at

    a relatively low frequency. However, this frequency

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    may be sufficiently high to act as a significant factor

    in the genetic changes of a chromosome during evo-

    lutionary time (Richardson & Palmer, 2007; Syvanen,

    2012). Interestingly, HGT in plants appears to

    involve a comparatively high level of exchange

    between mitochondria. It should not be forgotten

    that, in plants, the horizontal transfer of mobile ele-ments of either DNA or RNA, either as a naked

    nucleic acid or within a virus, could occur especially

    through, for example, tissues damaged by insects.

    Such foreign mobile elements could then be taken up

    and incorporated into the plant genomes. However, in

    multicellular organisms, it is likely that such a trans-

    fer would rarely occur directly into germ cell tissues

    and so be transmitted to the next generation

    (Bennetzen, 2000). Nevertheless, as described above,

    mobile DNA can readily enter vegetative cells of the

    shoot apex prior to forming the reproductive organs

    and so appear in the F1 generation (Gahan et al.,

    2003b).

    CONCLUSIONS

    Both animal and vascular plant systems have the

    capacity for CNAs to enter the reproductive systems

    where, in vascular plants, they are seen to influence

    the F1 generation. However, in eutherian systems,

    although there is a possible mechanism by which

    CNAs can influence the F1 generation, currently,

    there are few examples regarding the success of

    HGT and the uptake of CNAs entering the F 1 gen-

    eration. Such examples appear to be restricted tolower organisms such as bdelloid rotifers (Boschetti

    et al., 2012) or Lepidoptera (Sun et al., 2013). This

    may be a result, in part, of the limited number of

    observations made. It also appears to be influenced

    by the germ cell line leading to the formation of

    gametes and to the way in which modified gametes

    are made available that may well limit the possi-

    bilities of the F1 being modified. By contrast, the

    vegetative cells of vascular plants are more readily

    available to genetic modification prior to producing

    reproductive elements. This process also allows

    genetic fragments transferred by HGT not only to

    enter somatic cells, but, more importantly, alsooffers an explanation for the successful entry into

    gametes and hence the continuation in the subse-

    quent generation(s) of the recipient vascular plant,

    although this is less so in higher animals. Clearly,

    there is a requirement for a more systematic study

    of CNAs and HGT in vascular plant systems, and

    especially of CNAs in animal systems, with the aim

    of further clarifying a possible influence of CNAs on

    F1 and subsequent generations, as well as in the

    evolutionary process.

    ACKNOWLEDGEMENTS

    I wish to thank the reviewers for their very helpful

    comments for the improvement of the manuscript and

    to Dr Maurice Stroun and Professor M. S. Black for

    stimulating discussion.

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